Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRC | rs62154952 | chr2:67620199 | A/C | 2.27E-7 | 504 | 37.35 | 37.75 | 2.03 | KM Plot |
KIRC | rs62154955 | chr2:67626014 | C/A | 1.98E-7 | 505 | 37.33 | 38.65 | 2.03 | KM Plot |
KIRC | rs62154957 | chr2:67629445 | A/G | 2.16E-7 | 507 | 37.33 | 37.75 | 2.03 | KM Plot |
KIRC | rs62154958 | chr2:67629452 | A/C | 2.02E-7 | 504 | 37.18 | 38.65 | 2.03 | KM Plot |
KIRC | rs62156548 | chr2:67529473 | G/C | 1.63E-7 | 505 | 37.18 | 37.73 | 2.03 | KM Plot |
KIRC | rs62156549 | chr2:67529527 | C/T | 1.63E-7 | 505 | 37.18 | 37.73 | 2.03 | KM Plot |
KIRC | rs62156689 | chr2:67633039 | A/G | 2.2E-7 | 507 | 37.33 | 37.7 | 2.03 | KM Plot |
KIRC | rs62156692 | chr2:67637920 | A/G | 2.2E-7 | 507 | 37.33 | 37.7 | 2.03 | KM Plot |
KIRC | rs62156693 | chr2:67639583 | A/G | 2.28E-7 | 507 | 37.37 | 37.35 | 2.03 | KM Plot |
KIRC | rs62156754 | chr2:67669944 | C/T | 2.04E-7 | 508 | 37.33 | 37.73 | 2.03 | KM Plot |
KIRC | rs62156756 | chr2:67671015 | A/G | 2.32E-7 | 504 | 37.37 | 37.73 | 2.03 | KM Plot |
KIRC | rs62156757 | chr2:67671035 | C/A | 2.32E-7 | 504 | 37.37 | 37.73 | 2.03 | KM Plot |
KIRC | rs62156758 | chr2:67671769 | C/G | 2.25E-7 | 505 | 37.33 | 37.75 | 2.03 | KM Plot |
KIRC | rs62158280 | chr2:67535694 | C/G | 1.68E-7 | 508 | 37.35 | 37.7 | 2.03 | KM Plot |
KIRC | rs62158281 | chr2:67537175 | T/A | 1.68E-7 | 508 | 37.35 | 37.7 | 2.03 | KM Plot |